Full Services User Overview
A virtual consultation with the PMF Director is required prior to submitting samples to check for compatibility of sample type and format with our analytical approaches and to confirm the experimental approach and expectations for the services. Please review the Full Service Users section of our Policies and Procedures Manual for detailed instructions then complete our Sample Submission Form. For Metabolomics customers, instructions to properly prepare your samples for submission can be found in our Metabolomics Sample Prep document.
If you have any questions, you can find our contact information in the "CONTACT US" tab. For pricing see the "SERVICE FEES" page.
Full Services Metabolomics Offering
Metabolomics services include:
- Untargeted Quantification of a wide range of small molecules
- Primary metabolism using GC-MS and NIST/Fiehn Libraries – GC-MS Untargeted assay - Flat Fee/sample.
- Secondary metabolism using LC-MS (HILIC and/or RP separations) combined to Data processing using Compound Discoverer integrating several libraries (NIST Library, mzCloud, in-house library) - LC-MS Untargeted Assay - Contact us for quote.
- Small Peptides (2-3 amino acids long) using LC-MS (HILIC and/or RP separations) combined to Data processing using Progenesis QI integrating the NIST library - LC-MS Untargeted Assay - Contact us for quote.
- Targeted Quantification using HPLC, GCMS or LCMS. See table below for a full list of compounds and costs.
- See "METABOLOMICS PLATFORM" tab for more information on our metabolomics instrumentation.
| HPLC Targeted Assay - Flat Fee/sample | |
| Free Amino Acids (25) | Ala, Arg, Asn, Asp, Cys, Cys2, Gln, Glu, Gly, His, Ile, Leu, Lys, Met, Phe, Pro, Ser, Thr, Trp, Tyr, Val, Tau, GABA, Orn, HyPro |
| Hydrolyzed Amino Acids (17) | Arg, Ile, Leu, Val, Phe, Tyr, Asp, Glu, MetS, CyA, Ser, Thr, Arg, His, Lys, Gly, Pro |
| Carotenoids/ Xantophylls (11) | Neoxanthin, Zeaxanthin, Lutein, Antheraxanthin, Violaxanthin, alpha-Cryptoxanthin, beta-Cryptoxanthin, alpha-Carotene, beta-Carotene, Chlorophyll A, Chlorophyll B |
| GC-MS Targeted Assay - Flat Fee/sample | |
| Free Sugars (11) | Fructose, Sucrose, Glucose, Raffinose, Arabinose, Mannose, Xylose, Galactose, Lactose, Pinitol, Trehalose |
| Short Chain Fatty Acids (SCFAs) (9) | Acetic Acid, Formic Acid, Propionic Acid, Butyric Acid, Isobutyric Acid, 2-Methylbutanoic Acid, Valeric Acid, Isovaleric Acid, Hexanoic Acid |
| Fatty Acid Methyl Esters (FAMEs) (14) | Methyl Octanoate, Methyl Decanoate, Methyl Laurate, Methyl Myristate, Methyl Palmitate, Methyl Palmitoleate, Methyl Stearate, Methyl Oleate, Methyl Linoleate, Methyl Arachidiate, Methyl Linoleate, Methyl Behenate, Methyl Erucate, Methyl Lignocerate |
| LC-MS Targeted Assay – “A la carte” - Contact us for quote | |
| Polyamines Metabolism (7) | Arginine, Ornithine, Methionine, Agmatine, Putrescine, Spermine, Spermidine |
| Non-Mevalonate Pathway (7) | 1-Deoxy-D-xylulose 5-phosphate (DXP), 2-C-methylerythritol 4-phosphate (MEP), 4-diphosphocytidyl-2-C-methylerythritol (CDP-ME), 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEcPP), Dimethylallyl pyrophosphate (DMAPP), (E)-4-Hydroxy-3-methyl-but-2-enyl pyrophosphate (HDMAPP), Isopentenyl pyrophosphate (IPP) |
| Free Amino Acids (25) | Ala, Arg, Asn, Asp, Cys, Cys2, Gln, Glu, Gly, His, Ile, Leu, Lys, Met, Phe, Pro, Ser, Thr, Trp, Tyr, Val, Tau, GABA, Orn, HyPro |
| Bile Acids (16) | Cholic Acid, Chenodeoxycholic Acid, Deoxycholic Acid, Glycocholic Acid, Glycochenodeoxycholic Acid, Glycodeoxycholic Acid, Glycolithocholic Acid, Hyocholic Acid, Lithocholic Acid, Taurocholic Acid, Taurodeoxycholic Acid, Taurochenodeoxycholic Acid, Taurolithocholic Acid, Alpha-muricholic Acid, Beta-muricholic Acid, Omega-muricholic Acid |
| Steroids (23) | Aldosterone, Androsterone, Androstenedione, Corticosterone, Cortisol, Cortisone, Cortexolone, Cortexone, Dehydroepiandrosterone, Dehydroepiandrosterone sulfate, 5α-Dihydrotestosterone, Estriol, Estrone, Estradiol, Etiocholanolone, 2-Methoxyestradiol, 17-Hydroxypregnenolone, Pregnenolone, allo-Pregnanolone, beta-Pregnanolone, Progesterone, 17a-Hydroxyprogesterone, Testosterone |
| Pyrimidine and Purine Pathway (39) | Adenine, Adenosine, AMP, ATP, Guanine, Guanosine, GMP, GDP, GTP, Deoxyadenosine, dAMP, dADP, dATP, Deoxyguanosine, dGMP, dGTP, Cytidine, Cytosine, CMP, CDP, CTP, Deoxycytosine, dCMP, dCDP, dCTP, Uracil, Uridine, UMP, UDP, UTP, Deoxyuridine, dUMP, dUTP, dTDP, Thymine, Thymidine, dTMP/TMP, dTDP/TDP, dTTP/TTP |
| TCA Cycle/ Glycolysis/ Pentose Phosphate Pathway (20) | Pyruvic Acid, Glutamic Acid, Aconitate, Lactic Acid, Fumaric Acid, Succinic Acid, Malic Acid, Phosphoenolpyruvate, Dihydroxyacetone phosphate, Glycerol 3-phosphate, 3-Phosphoglyceric Acid, 2-Phosphoglyceric Acid, Citric Acid, Ribose-5-phosphate, Fructose-6-Phosphate, Glucose-6-Phosphate, Glucose-1-Phosphate, Fructose-1,6-Bisphosphate, Sedoheptulose-7-Phosphate, Erythrose-4-Phosphate |
Phytohormones (43) | “Common” Panel: Abscisic acid (ABA), Abscisic Acid Glucose Ester (ABA-GE), Salicylic acid (SA), Jasmonic acid (JA), JA-Ile, JA-Leu, Methyl-JA, 12-oxo-phytodienoic acid (OPDA), Indole-3-acetic acid (IAA), Methyl-IAA, IAA-Asp, IAA-Ala, IAA-Trp, IAA-Glu, 6-Benzylaminopurine, Indole-3-butyric acid (IBA), Indole-3-carboxylic acid, Indole-3-lactic acid, 3-Indolepropionic acid, N6-2-isopentanyladenine, trans-Zeatin, cis-Zeatin, Dihydrozeatin (DHZ), trans-ZRiboside, cis-ZRiboside |
“Expanded” Panel (A la carte): Strigol, 5-Deoxystrigol, Orobanchol DIMBOA, GA1, GA3, GA4, GA8, GA9, GA12, GA19, GA20, GA24, GA29, GA53, Brassinolide, Benzoic acid, Kinetin | |
Flavonoids, Phenolic Acids, and more (67) | “Common” Panel: Anthocyanins and Proanthocyanidins: Delphinidin, Proanthocyanidin A2, Procyanidin B1; Hydroxybenzoic and Hydroxycinnamic acids : Protocatechuic Acid, Vanillic Acid, Gallic Acid, Ellagic acid, Syringic Acid, Caffeic Acid, Cinnamic Acid, Chlorogenic acid, Coumaric Acid, Ferulic Acid, Sinapic acid; Flavones and Isoflavones: Apigenin, Luteolin, Daidzein, Genistein; Flavonols and Flavonones: Catechin, Epicatechin, Epigallocatechin, Epicatechin Gallate, Kaempferol, Quercetin, Hesperetin, Naringenin; Flavonol glycosides and Flavanone glycosides: Quercetin-3-Glucoside, Quercetin-3-Galactoside, Rutin; Chalcones and others: Phloretin, Chalconaringenin, Resveratrol |
“Expanded” Panel (A la carte} Anthocyanins and Proanthocyanidins: Cyanidin-3-glucoside, Cyanidin-3-rutinoside, Apigeninidin, Procyanidin B2, Procyanidin B3, Procyanidin B4, Procyanidin C1, Procyanidin C2 Hydroxybenzoic and Hydroxycinnamic acids: Hydroxybenzoic acid, 4-Methoxycinnamic acid, Cryptochlorogenic acid Flavones and Isoflavones: Chrysin, Glycitein, Biochanin A, Formononetin. Tricin Flavonols and Flavonones: Isorhamnetin, Fisetin, Myricetin, Galangin, Pinocembrin, Pinobanksin Flavonol glycosides and Flavanone glycosides: Kaempferol 3-O- β-rutinoside, Naringin, Diosmin, Herperidin, Swertisin Chalcones and others: Coumestrol, Coumarin, Caffeine, Trigonelline, Matairesinol, Secoisolariciresinol, Lariciresinol, Mangiferin, Mimosine | |
| Alpha and Beta Acids (6) | Cohumulone, Humulone, Adhumulone, Colupulone, Lupulone, Adlupulone |